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  • Bidirectional Variable-Order de Bruijn Graphs 

    Belazzougui, Djamal; Gagie, Travis; Mäkinen, Veli; Previtali, Marco; Puglisi, Simon J.
    In : (Springer International Publishing, Ensenada, Mexico, 2016-03-22)
    Implementing de Bruijn graphs compactly is an important problem because of their role in genome assembly. There are currently two main approaches, one using Bloom filters and the other using a kind of Burrows-Wheeler Transform on the edge labels of the graph. The second representation is more elegant and can even handle ...

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